Function reference • diffudist

All functions
`eigenMapMatMult()`	Matrix Multiplication using RcppEigen
`eigenMatMult()`	Matrix Multiplication using RcppEigen
`get_spectral_decomp()`	Laplacian Spectral Decomposition
`get_ddm_from_eigendec()`	Distance Matrix from Laplacian spectral decomposition
`get_diffusion_probability_matrix()` `getDiffusionProbabilityMatrix()` `get_diffu_Pt()`	Diffusion Probability Matrix
`get_diffusion_probability_matrix_from_T()` `get_diffu_Pt_from_T()` `get_diffu_Pt_from_Pi()` `get_diffusion_probability_matrix_from_Pi()`	Diffusion probability matrix from transition matrix
`get_distance_matrix()` `getDistanceMatrix()` `get_DDM()`	Diffusion Distance Matrix
`get_distance_matrix_from_T()` `get_DDM_from_T()` `get_distance_matrix_from_Pi()` `get_DDM_from_Pi()`	Diffusion distance matrix from a custom transition matrix
`get_laplacian()` `getLaplacianMatrix()`	Evaluate a Laplacian Matrix
`get_mean_distance_matrix()` `getMeanDistanceMatrix()`	Mean distance matrix
`plot(<diffudist>)`	Plot distance matrix
`plotHeatmap()`	Plot distance matrix as heatmap

Reference